STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0ECE9Unplaced genomic scaffold scaffold_43, whole genome shotgun sequence. (175 aa)    
Predicted Functional Partners:
A0A0D0DSQ2
Unplaced genomic scaffold scaffold_156, whole genome shotgun sequence.
   
 0.997
A0A0D0ECD4
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.997
A0A0D0D5N1
Unplaced genomic scaffold scaffold_505, whole genome shotgun sequence.
    
 0.996
A0A0D0DX54
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.995
A0A0D0E419
Unplaced genomic scaffold scaffold_50, whole genome shotgun sequence.
   
 0.995
A0A0D0E766
Unplaced genomic scaffold scaffold_114, whole genome shotgun sequence.
    
 0.993
A0A0D0E863
Unplaced genomic scaffold scaffold_79, whole genome shotgun sequence.
    
 0.993
A0A0D0DQX7
Unplaced genomic scaffold scaffold_893, whole genome shotgun sequence.
    
 0.990
A0A0D0E9X3
Unplaced genomic scaffold scaffold_27, whole genome shotgun sequence.
   
 
 0.989
A0A0D0DZU8
Serine/threonine-protein phosphatase.
   
 0.988
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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