STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0ECV0Unplaced genomic scaffold scaffold_22, whole genome shotgun sequence; Belongs to the small GTPase superfamily. Arf family. (187 aa)    
Predicted Functional Partners:
A0A0D0C4M7
Unplaced genomic scaffold scaffold_1897, whole genome shotgun sequence.
    
 0.998
A0A0D0CY96
Unplaced genomic scaffold scaffold_1160, whole genome shotgun sequence.
   
 0.997
A0A0D0E763
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.967
A0A0D0E805
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.966
A0A0D0E9E6
AP-1 complex subunit gamma.
    
 0.963
A0A0D0E3M6
Unplaced genomic scaffold scaffold_57, whole genome shotgun sequence.
    
 0.951
A0A0D0EAP4
Unplaced genomic scaffold scaffold_10, whole genome shotgun sequence.
   
 0.950
A0A0D0DVP2
Unplaced genomic scaffold scaffold_347, whole genome shotgun sequence.
   
 0.940
A0A0D0E0F0
Unplaced genomic scaffold scaffold_145, whole genome shotgun sequence; Belongs to the PI3/PI4-kinase family.
    
 0.936
A0A0D0E412
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.932
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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