STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0ED13Unplaced genomic scaffold scaffold_14, whole genome shotgun sequence. (515 aa)    
Predicted Functional Partners:
A0A0D0DJI1
Unplaced genomic scaffold scaffold_910, whole genome shotgun sequence.
   
 0.999
A0A0D0DXL4
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 0.999
A0A0D0EC43
Unplaced genomic scaffold scaffold_61, whole genome shotgun sequence.
   
 0.999
A0A0D0E0E8
Unplaced genomic scaffold scaffold_380, whole genome shotgun sequence.
   
 0.996
A0A0D0E9L3
Unplaced genomic scaffold scaffold_35, whole genome shotgun sequence.
   
 0.954
A0A0D0E4J6
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
    
 0.948
A0A0D0E4G7
Unplaced genomic scaffold scaffold_183, whole genome shotgun sequence.
     
 0.924
A0A0D0DN49
Unplaced genomic scaffold scaffold_381, whole genome shotgun sequence.
     
 0.825
A0A0D0DAB6
Unplaced genomic scaffold scaffold_311, whole genome shotgun sequence.
   
 0.575
A0A0D0DJ32
Unplaced genomic scaffold scaffold_73, whole genome shotgun sequence.
   
 0.573
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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