STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0BX00Unplaced genomic scaffold CY34scaffold_16, whole genome shotgun sequence. (1237 aa)    
Predicted Functional Partners:
A0A0C9ZSE7
Unplaced genomic scaffold CY34scaffold_161, whole genome shotgun sequence.
    
  0.702
A0A0D0B8Y9
Unplaced genomic scaffold CY34scaffold_97, whole genome shotgun sequence.
    
 0.590
A0A0D0BIL1
Unplaced genomic scaffold CY34scaffold_2, whole genome shotgun sequence.
    
 0.587
A0A0C9ZW78
Unplaced genomic scaffold CY34scaffold_119, whole genome shotgun sequence.
    
  0.567
A0A0D0AVY6
Unplaced genomic scaffold CY34scaffold_35, whole genome shotgun sequence; Belongs to the WD repeat SEC13 family.
    
  0.540
A0A0D0B4Z0
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
  0.538
A0A0D0B8M9
Unplaced genomic scaffold CY34scaffold_99, whole genome shotgun sequence.
    
  0.527
A0A0D0AVB0
Nuclear pore protein.
    
  0.517
A0A0D0AZP7
Unplaced genomic scaffold CY34scaffold_197, whole genome shotgun sequence; Belongs to the WD repeat SEC13 family.
    
  0.516
A0A0D0A9H1
Unplaced genomic scaffold CY34scaffold_570, whole genome shotgun sequence.
    
  0.512
Your Current Organism:
Suillus luteus
NCBI taxonomy Id: 930992
Other names: S. luteus UH-Slu-Lm8-n1, Suillus luteus UH-Slu-Lm8-n1
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