STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC04585.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
ALC04586.1
Two-component system, sensory transduction histidine kinase.
 
 0.978
ALC06766.1
Two-component system, sensory transduction histidine kinase.
 
 
 0.876
senX3
Signal-transduction histidine kinase senX3.
 
 0.875
ALC06723.1
Hypothetical protein.
 
 
 0.872
mtrB
Sensor histidine kinase MtrB.
 
 0.846
ALC05322.1
Hypothetical protein.
 
 
 0.835
ALC04767.1
Hypothetical protein.
 
 
 0.793
ALC04588.1
Hypothetical protein.
 
   
 0.661
ALC04587.1
Putative heavy metal-associated transport protein.
  
    0.640
ALC04584.1
Hypothetical protein.
 
  
 0.522
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.