STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC04895.1ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (356 aa)    
Predicted Functional Partners:
ALC04896.1
ABC transporter ATPase.
 
 
 0.986
ALC04894.1
ABC transporter periplasmic component.
 
 
 0.978
ALC06030.1
ABC transporter ATPase.
 
 
 0.887
ALC05143.1
ABC transporter ATPase.
 
 
 0.866
ALC04893.1
Hypothetical protein.
 
  
 0.855
fepC
Ferric enterobactin transport ATP-binding protein FepC.
 
 
 0.751
ALC05134.1
Putative siderophore transport system ATP-binding protein.
 
 
 0.710
ALC05142.1
Hypothetical protein.
 
 
 0.689
ALC06029.1
Hypothetical protein.
 
 
 0.645
ALC04892.1
Hypothetical protein.
  
  
 0.642
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.