STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
regX3Sensory transduction protein regX3. (232 aa)    
Predicted Functional Partners:
senX3
Signal-transduction histidine kinase senX3.
 0.997
ALC06723.1
Hypothetical protein.
 
 0.865
mtrB
Sensor histidine kinase MtrB.
 
 0.845
ALC05322.1
Hypothetical protein.
 
 
 0.830
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.820
ALC06766.1
Two-component system, sensory transduction histidine kinase.
 
 0.819
ALC04586.1
Two-component system, sensory transduction histidine kinase.
 
 0.809
mshA
D-inositol 3-phosphate glycosyltransferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
       0.780
ALC04767.1
Hypothetical protein.
 
 
 0.778
ALC04903.1
long-chain-fatty-acid-CoA ligase.
       0.632
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.