STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC04942.1Hypothetical protein. (543 aa)    
Predicted Functional Partners:
ALC04943.1
Cytochrome C assembly protein.
 
  
 0.980
ALC04941.1
Hypothetical protein.
 
  
 0.971
ALC04940.1
Thiol-disulfide isomerase or thioredoxin.
 
  
 0.948
ALC04939.1
Phosphoglycerate mutase.
 
    0.832
qcrC
Putative menaquinol-cytochrome c reductase cytochrome c subunit.
 
  
 0.791
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
  
  
 0.785
ALC04930.1
uroporphyrinogen-III synthase.
 
    0.767
qcrA
Menaquinol-cytochrome c reductase iron-sulfur subunit.
  
     0.762
ALC06602.1
Hypothetical protein.
  
    0.745
ctaF
Cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.744
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.