STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC04952.1Hypothetical protein. (105 aa)    
Predicted Functional Partners:
pit
Putative low-affinity inorganic phosphate transporter.
 
     0.700
ALC04951.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.656
ALC06838.1
Hypothetical protein.
  
     0.600
ALC04911.1
Hypothetical protein.
  
     0.579
ALC06923.1
Hypothetical protein.
  
     0.564
ALC04953.1
Putative membrane protein.
       0.549
ALC05846.1
Hypothetical protein.
  
     0.542
ALC06087.1
Hypothetical protein.
  
     0.535
ALC06928.1
Hypothetical protein.
  
     0.525
aftA
Arabinofuranosyltransferase AftA.
  
     0.509
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.