STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC04973.1Amino acid permease. (417 aa)    
Predicted Functional Partners:
ALC04970.1
Regulatory protein.
 
   
 0.939
ALC04974.1
Hypothetical protein.
       0.718
gabT
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.717
ALC07085.1
Hypothetical protein.
  
 
 0.713
ALC04975.1
Hypothetical protein.
       0.708
ALC06881.1
Hypothetical protein.
  
     0.656
ALC04578.1
Hypothetical protein.
  
   0.651
ALC05753.1
Hypothetical protein.
  
     0.640
ALC06894.1
Hypothetical protein.
  
     0.639
ALC06084.1
Hypothetical protein.
  
     0.631
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.