STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC05054.1Hypothetical protein; Belongs to the WXG100 family. (96 aa)    
Predicted Functional Partners:
ALC05053.1
Hypothetical protein; Belongs to the WXG100 family.
 
 
 0.999
ALC05051.1
Hypothetical protein.
 
 
 
 0.940
ALC05045.1
Hypothetical protein.
 
 
 0.774
ftsK
DNA translocase FtsK.
   
 
 0.743
ALC05050.1
Hypothetical protein.
 
   
 0.689
ALC05052.1
Hypothetical protein.
       0.574
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.563
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
       0.563
ALC05279.1
Hypothetical protein.
 
 
   0.559
ALC05231.1
Hypothetical protein.
  
     0.548
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.