STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC05133.1Hypothetical protein. (298 aa)    
Predicted Functional Partners:
ALC05135.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.980
ALC05137.1
ABC transporter periplasmic component.
 
  
 0.901
ALC05134.1
Putative siderophore transport system ATP-binding protein.
  
 0.877
ALC05136.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.852
ripA
HTH-type transcriptional repressor of iron proteins A.
 
    0.730
ALC04999.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.714
ALC04834.1
Periplasmic component of ABC-type Fe3+-siderophore transport system.
  
    0.712
ALC05262.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.694
icd
Isocitrate dehydrogenase [NADP]; Belongs to the monomeric-type IDH family.
       0.674
ALC05138.1
Hypothetical protein.
 
     0.667
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.