STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC05411.1Hypothetical protein. (179 aa)    
Predicted Functional Partners:
uppS1
Isoprenyl transferase 1; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
   0.762
ALC05753.1
Hypothetical protein.
  
     0.760
ALC06881.1
Hypothetical protein.
 
     0.755
ALC05044.1
Hypothetical protein.
  
     0.754
ALC06084.1
Hypothetical protein.
  
     0.746
ALC05278.1
Hypothetical protein.
  
     0.745
ALC05104.1
ABC transporter permease.
  
     0.743
ALC06081.1
Hypothetical protein.
 
     0.741
ALC04578.1
Hypothetical protein.
  
     0.740
ALC05517.1
Hypothetical protein; Belongs to the glycosyl hydrolase 32 family.
  
     0.729
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.