STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC05419.1Hypothetical protein. (293 aa)    
Predicted Functional Partners:
ALC05420.1
Allophanate hydrolase subunit 1.
 
 0.999
pxpA
UPF0271-like protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 0.987
ALC05422.1
Hypothetical protein.
 
  
 0.856
ALC06666.1
UPF0317-like protein; Belongs to the D-glutamate cyclase family.
  
    0.598
ALC05531.1
Hypothetical protein.
  
  
 0.571
ALC05423.1
Hypothetical protein.
       0.567
ALC05694.1
Transcriptional regulator.
  
    0.440
ALC06550.1
Hypothetical protein.
  
    0.440
ALC07070.1
Hypothetical protein.
  
    0.440
ALC07097.1
IclR family transcriptional regulator.
  
    0.440
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.