STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
odhIOxoglutarate dehydrogenase inhibitor. (143 aa)    
Predicted Functional Partners:
odhA
2-oxoglutarate dehydrogenase E1/E2 component.
    
 
 0.996
ALC06825.1
Serine/threonine protein kinase.
 
 
 
 0.996
pknB
Putative serine/threonine-protein kinase PknB.
 
 
 
 0.995
ALC06358.1
Serine/threonine protein kinase.
 
 
 
 0.989
pknA
Serine/threonine-protein kinases PknA.
 
 
 
 0.953
murC
UDP-N-acetylmuramate-L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
      
 0.907
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.849
ALC05811.1
Hypothetical protein.
 
    0.794
ALC04528.1
Hypothetical protein.
  
   
 0.772
ALC05404.1
Putative secreted protein.
   
 
 0.769
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.