STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC05836.1Hypothetical protein. (491 aa)    
Predicted Functional Partners:
ALC05835.1
Hypothetical protein.
       0.631
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit.
    
   0.626
ALC05569.1
DNA repair exonuclease.
   
   0.571
ALC07102.1
Phosphoesterase.
   
   0.571
ALC04641.1
Ankyrin repeat-containing protein.
    
 
 0.543
ALC06241.1
Ankyrin repeat-containing protein.
    
 
 0.543
ALC06509.1
Ankyrin repeat-containing protein.
    
 
 0.543
ALC06926.1
Polyketide synthase.
    
 
 0.468
acpP
Hypothetical protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.424
ALC05831.1
Phosphoribosyltransferase.
       0.415
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.