STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC05967.1NifU-like protein. (149 aa)    
Predicted Functional Partners:
csd
Putative cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.992
ALC05969.1
Vegetative protein 296.
 
  
 0.983
ALC05966.1
Aromatic ring hydroxylating enzyme.
  
    0.977
iscS
Cysteine desulfurase.
  
 0.966
ALC05627.1
Hypothetical protein.
  
 0.966
ALC05970.1
UPF0051-like protein.
 
  
 0.944
ALC04710.1
Hypothetical protein.
  
 
 0.906
sufB
FeS cluster assembly protein SufB.
 
  
 0.905
ALC07093.1
Cytochrome P450 family protein.
  
 0.853
ALC06563.1
Benzoate 1,2-dioxygenase ferredoxin reductase subunit.
  
 0.844
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.