STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC06148.135 kDa protein. (276 aa)    
Predicted Functional Partners:
ALC06149.1
Transcriptional regulator.
  
  
 0.815
ALC06362.1
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.774
ALC05306.1
Hypothetical protein.
  
     0.772
ALC05083.1
Hypothetical protein.
 
 
 0.769
ALC05996.1
Hypothetical protein.
  
     0.769
ALC05149.1
Hypothetical protein.
  
     0.749
ALC06259.1
Hypothetical protein.
  
     0.747
ALC05577.1
Hypothetical protein.
  
 
 0.730
ALC06785.1
Hypothetical protein.
  
     0.727
ALC05659.1
Hypothetical protein.
  
     0.722
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.