STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC06349.1Insertion element DNA-binding protein. (160 aa)    
Predicted Functional Partners:
insK150e
Putative transposase InsK for insertion sequence element IS150.
 
     0.825
insK150a
Putative transposase InsK for insertion sequence element IS150.
  
     0.578
insK150b
Putative transposase InsK for insertion sequence element IS150.
  
     0.578
insK150g
Putative transposase InsK for insertion sequence element IS150.
  
     0.560
insK150c
Putative transposase InsK for insertion sequence element IS150.
  
    0.536
insK150d
Putative transposase InsK for insertion sequence element IS150.
  
    0.536
insK150f
Putative transposase InsK for insertion sequence element IS150.
  
    0.536
ALC05582.1
Transposase for insertion sequence.
  
    0.506
Your Current Organism:
Corynebacterium deserti
NCBI taxonomy Id: 931089
Other names: C. deserti GIMN1.010, Corynebacterium deserti GIMN1.010, Corynebacterium sp. GIMN1.010
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