STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_00552Methyltransferase type 11; COG0500 SAM-dependent methyltransferases. (237 aa)    
Predicted Functional Partners:
C448_14208
NADH-ubiquinone oxidoreductase chain 49kDa; COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 0.906
C448_14378
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 0.906
C448_02588
S-adenosylmethionine-dependent methyltransferase 1; COG0500 SAM-dependent methyltransferases.
  
  
 
0.746
C448_01599
Type 11 methyltransferase; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis.
  
  
  0.714
C448_06980
Type 11 methyltransferase; COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis.
  
   
 0.701
C448_13246
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; COG0500 SAM-dependent methyltransferases.
  
   
 0.634
C448_07362
Methyl transferase-like protein; COG0500 SAM-dependent methyltransferases.
  
   
 0.615
rps5p
30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.
    
 0.604
C448_00557
COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.553
C448_11921
Type 12 methyltransferase; COG0500 SAM-dependent methyltransferases.
  
     0.552
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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