STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_03331TrkA domain-containing protein; COG0569 K+ transport systems, NAD-binding component. (222 aa)    
Predicted Functional Partners:
C448_14844
Trk-type transport system (substrate potassium) 1, subunit 2.1; COG0168 Trk-type K+ transport systems, membrane components.
 
 
 0.893
C448_14854
TRK potassium uptake system protein TrkH; COG0168 Trk-type K+ transport systems, membrane components.
 
 
 0.893
aroA-2
Fructose-bisphosphate aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids.
   
    0.725
C448_08044
Putative transport protein; COG0471 Di- and tricarboxylate transporters.
  
  
 0.716
C448_03326
Hypothetical protein.
       0.542
C448_00015
COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein.
   
    0.499
C448_10277
Sodium/proton antiporter, cpa1 family protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
 
   
 0.487
C448_15371
Serine protein kinase, PrkA; COG2766 Putative Ser protein kinase.
   
    0.483
hemD
COG1587 Uroporphyrinogen-III synthase.
  
    0.471
C448_00892
TrkA-N domain-containing protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
 
   
 0.427
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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