STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_04259Putative restriction/modification enzyme. (201 aa)    
Predicted Functional Partners:
C448_15508
Putative restriction/modification enzyme; COG1002 Type II restriction enzyme, methylase subunits.
 
      0.899
C448_04015
Putative restriction/modification enzyme; COG1002 Type II restriction enzyme, methylase subunits.
 
      0.893
C448_15496
Putative restriction/modification enzyme; COG1002 Type II restriction enzyme, methylase subunits.
 
      0.887
C448_02913
Hypothetical protein; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
       0.545
C448_00280
Rhodanese-like protein; COG0607 Rhodanese-related sulfurtransferase.
       0.476
C448_05708
Fused rhodanese domain-containing protein/hydrolase; COG0607 Rhodanese-related sulfurtransferase.
       0.476
C448_05828
Rhodanese-like protein; COG0607 Rhodanese-related sulfurtransferase.
       0.476
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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