STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_05316COG1785 Alkaline phosphatase. (494 aa)    
Predicted Functional Partners:
C448_06800
COG0584 Glycerophosphoryl diester phosphodiesterase.
  
 
 0.813
dnaK
Molecular chaperone DnaK; Acts as a chaperone.
 
 
 
 0.747
C448_05116
Endonuclease/exonuclease/phosphatase family protein.
  
  
 0.745
C448_06368
COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
    
 0.713
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
    
  0.673
C448_05321
Alcohol dehydrogenase zinc-binding domain protein; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
  
 
  0.654
C448_04469
COG0294 Dihydropteroate synthase and related enzymes.
     
 0.568
C448_05146
COG0285 Folylpolyglutamate synthase.
     
 0.568
C448_05968
Sugar ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
   
 
 0.567
C448_12216
Putative sugar ABC transporter periplasmic substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
   
 
 0.567
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.