STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_06198COG0498 Threonine synthase. (396 aa)    
Predicted Functional Partners:
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
 
 0.966
C448_02246
COG0460 Homoserine dehydrogenase.
 
 0.910
C448_09275
COG1171 Threonine dehydratase.
  
 
 0.787
C448_15264
COG1171 Threonine dehydratase.
  
 
 0.787
C448_12581
Pyridoxal-5'-phosphate-dependent protein subunit beta; COG1171 Threonine dehydratase.
 
 
 0.772
C448_00662
Pyridoxal-5'-phosphate-dependent protein subunit beta; COG0498 Threonine synthase.
  
  
 
0.721
C448_08759
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
  
  
 
0.709
C448_08569
COG0527 Aspartokinases; Belongs to the aspartokinase family.
  
 
 0.708
C448_00732
COG2008 Threonine aldolase.
     
 0.684
C448_11031
COG0066 3-isopropylmalate dehydratase small subunit.
  
  
 0.660
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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