STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_06383CBS domain containing membrane protein; COG0517 FOG: CBS domain. (163 aa)    
Predicted Functional Partners:
C448_06373
Hypothetical protein.
       0.620
C448_06378
Peptidase S45 penicillin amidase; COG2366 Protein related to penicillin acylase.
       0.620
C448_06388
COG2217 Cation transport ATPase.
       0.553
C448_13966
COG3620 Predicted transcriptional regulator with C-terminal CBS domains.
  
   
 0.524
guaAB
GMP synthase subunit B; Catalyzes the synthesis of GMP from XMP.
  
 0.518
C448_05191
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN.
  
 
 0.460
C448_07117
Signal-transduction protein containing camp-binding and cbs domains; COG0517 FOG: CBS domain.
 
    0.449
C448_08604
GTP-binding protein; COG1100 GTPase SAR1 and related small G proteins.
  
 0.444
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
  
  
 0.441
C448_03511
CBS domain-containing protein; COG0517 FOG: CBS domain.
  
     0.413
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.