STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_07097Creatininase; COG1402 Uncharacterized protein, putative amidase. (255 aa)    
Predicted Functional Partners:
C448_02114
Creatininase; COG1402 Uncharacterized protein, putative amidase.
  
  
 
0.732
C448_02416
COG1402 Uncharacterized protein, putative amidase.
  
  
 
0.692
C448_04976
N-isopropylammelide isopropylaminohydrolase; COG0402 Cytosine deaminase and related metal-dependent hydrolases.
    
  0.602
C448_07102
COG0520 Selenocysteine lyase.
       0.549
C448_07644
N-isopropylammelide isopropylamino hydrolase; COG0402 Cytosine deaminase and related metal-dependent hydrolases.
    
  0.523
C448_11426
COG1985 Pyrimidine reductase, riboflavin biosynthesis.
    
 0.493
C448_07087
PHP domain-containing protein; COG1796 DNA polymerase IV (family X).
       0.491
C448_07092
Hypothetical protein.
       0.491
C448_00712
Hypothetical protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
  
 0.462
C448_10402
Hypothetical protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
  
 0.462
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.