STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_07979Transposase, IS605 OrfB family protein; COG0675 Transposase and inactivated derivatives. (425 aa)    
Predicted Functional Partners:
C448_10702
COG0675 Transposase and inactivated derivatives.
  
     0.582
C448_09168
Replicative DNA helicase / cell division control protein 21 /MCM; COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family.
  
     0.566
C448_09442
COG1378 Predicted transcriptional regulators.
  
     0.538
C448_08219
Transposase, IS605 OrfB family protein; COG0675 Transposase and inactivated derivatives.
  
     0.516
C448_07674
COG0675 Transposase and inactivated derivatives.
  
     0.514
C448_08379
Transposase, IS605 OrfB family protein; COG0675 Transposase and inactivated derivatives.
  
     0.512
C448_08314
COG0675 Transposase and inactivated derivatives.
  
     0.507
C448_04015
Putative restriction/modification enzyme; COG1002 Type II restriction enzyme, methylase subunits.
  
     0.485
C448_09577
COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
     0.478
C448_08754
Death on curing protein; COG3654 Prophage maintenance system killer protein.
  
     0.421
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.