STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_07999Alcohol dehydrogenase zinc-binding domain-containing protein; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. (333 aa)    
Predicted Functional Partners:
C448_08004
COG0720 6-pyruvoyl-tetrahydropterin synthase.
 
     0.934
gch3-2
GTP cyclohydrolase III; Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity; Belongs to the archaeal-type GTP cyclohydrolase family.
       0.789
C448_15149
Oxidoreductase (glycolate oxidase iron-sulfur subunit); COG0277 FAD/FMN-containing dehydrogenases.
 
  
 0.773
C448_12786
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.739
C448_08024
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.675
C448_07989
Aldo/keto reductase; COG0673 Predicted dehydrogenases and related proteins.
  
 0.668
C448_12571
Sugar kinase, FGGY family protein; COG1070 Sugar (pentulose and hexulose) kinases; Belongs to the FGGY kinase family.
 
 
 0.624
C448_00732
COG2008 Threonine aldolase.
  
 
 0.615
C448_04100
COG0156 7-keto-8-aminopelargonate synthetase and related enzymes.
  
 
 0.615
gap
COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase.
  
 
 0.614
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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