STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_08379Transposase, IS605 OrfB family protein; COG0675 Transposase and inactivated derivatives. (376 aa)    
Predicted Functional Partners:
C448_07794
COG0675 Transposase and inactivated derivatives.
  
     0.696
C448_08104
COG0675 Transposase and inactivated derivatives.
  
     0.688
C448_03796
COG0675 Transposase and inactivated derivatives.
  
     0.685
C448_14333
COG0675 Transposase and inactivated derivatives.
  
     0.684
C448_14353
Transposase, IS605 OrfB family protein; COG0675 Transposase and inactivated derivatives.
  
     0.666
C448_07979
Transposase, IS605 OrfB family protein; COG0675 Transposase and inactivated derivatives.
  
     0.512
C448_14739
IS1341-type transposase (TCE32); COG0675 Transposase and inactivated derivatives.
  
     0.507
C448_10702
COG0675 Transposase and inactivated derivatives.
  
     0.461
C448_08384
COG1695 Predicted transcriptional regulators.
       0.416
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.