STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_08414CoA-binding domain protein; COG1042 Acyl-CoA synthetase (NDP forming). (700 aa)    
Predicted Functional Partners:
C448_08409
DRTGG domain protein; COG0857 BioD-like N-terminal domain of phosphotransacetylase.
 
  
 0.970
C448_03486
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
    
 0.928
C448_08069
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
  
 0.924
C448_07022
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
  
 0.923
C448_00657
2-methylcitrate synthase/citrate synthase II; COG0372 Citrate synthase.
  
 
 0.922
C448_11056
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
    
 0.913
C448_14999
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
    
 0.913
C448_07122
COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 
 0.875
C448_11216
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.875
C448_15044
COG1454 Alcohol dehydrogenase, class IV.
 
  
 0.875
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.