STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_10277Sodium/proton antiporter, cpa1 family protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters. (625 aa)    
Predicted Functional Partners:
C448_14854
TRK potassium uptake system protein TrkH; COG0168 Trk-type K+ transport systems, membrane components.
 
 
 0.955
C448_14844
Trk-type transport system (substrate potassium) 1, subunit 2.1; COG0168 Trk-type K+ transport systems, membrane components.
 
 
 0.954
C448_08044
Putative transport protein; COG0471 Di- and tricarboxylate transporters.
 
  
 0.908
C448_06268
NADH dehydrogenase (quinone); COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
     
 0.819
C448_00050
VWA containing CoxE-like protein; COG0038 Chloride channel protein EriC.
 
  
 0.791
C448_11866
COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
 
   
 0.703
C448_06248
Cation antiporter; COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit.
     
 0.611
C448_12921
Sodium/calcium exchanger membrane region; COG0530 Ca2+/Na+ antiporter.
 
 
 
 0.608
trpS
tryptophanyl-tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp).
 
  
 0.585
C448_13101
ATP-binding protein Mrp 1; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
     
 0.585
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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