STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_11926FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0492 Thioredoxin reductase. (230 aa)    
Predicted Functional Partners:
C448_11916
Hypothetical protein; COG0121 Predicted glutamine amidotransferase.
       0.773
C448_11921
Type 12 methyltransferase; COG0500 SAM-dependent methyltransferases.
       0.773
C448_07302
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0492 Thioredoxin reductase.
  
  
  0.623
C448_11846
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0492 Thioredoxin reductase.
  
  
  0.609
C448_02838
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase, cystathionine gamma-lyase, cystathionine beta-lyase.
   
 
 0.583
C448_00942
COG0174 Glutamine synthetase.
    
 0.533
C448_02523
Molybdenum cofactor biosynthesis protein MoeB; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
   
  
 0.481
C448_05763
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 0.470
C448_01754
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 0.464
C448_05743
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 0.464
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.