STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_12586COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (517 aa)    
Predicted Functional Partners:
C448_00782
COG0506 Proline dehydrogenase.
 
  
 0.790
C448_05893
COG1757 Na+/H+ antiporter.
  
  
 0.543
C448_00185
COG1757 Na+/H+ antiporter.
  
  
 0.528
C448_06283
Adenine phosphoribosyltransferase; May catalyze a purine salvage reaction, the substrate is unknown.
   
  
 0.512
C448_07789
Glutamine ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
  
  
 0.505
C448_08569
COG0527 Aspartokinases; Belongs to the aspartokinase family.
     
 0.499
C448_10057
COG1757 Na+/H+ antiporter.
  
  
 0.480
C448_10874
COG1301 Na+/H+-dicarboxylate symporters.
  
  
 0.457
C448_10062
COG1301 Na+/H+-dicarboxylate symporters.
  
  
 0.452
C448_04205
COG1966 Carbon starvation protein, predicted membrane protein.
  
    0.437
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.