STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_12761COG1953 Cytosine/uracil/thiamine/allantoin permeases. (454 aa)    
Predicted Functional Partners:
C448_12756
D-hydantoinase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
 
  
 0.763
C448_12766
Hydantoinase/carbamoylase family amidase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
  
 0.763
C448_07654
D-hydantoinase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
 
  
 0.588
C448_07659
D-hydantoinase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
 
  
 0.556
C448_12666
Amidohydrolase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
 
  
 0.555
C448_12716
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
  
 0.419
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.