STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_12876COG0381 UDP-N-acetylglucosamine 2-epimerase. (227 aa)    
Predicted Functional Partners:
C448_10744
Nucleotide sugar dehydrogenase; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.682
C448_12046
Nucleotide sugar dehydrogenase; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.682
C448_08169
COG1088 dTDP-D-glucose 4,6-dehydratase.
  
 
 0.657
C448_14680
N-type ATP pyrophosphatase superfamily protein; COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control.
  
 
 0.595
C448_04564
COG1045 Serine acetyltransferase.
  
 
 0.585
C448_12056
Glutamine--scyllo-inositol transaminase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.573
C448_08174
COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes.
  
 
 0.468
C448_13101
ATP-binding protein Mrp 1; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
    
 0.463
C448_03241
COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
 
 0.441
C448_00030
Peptidase M50; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
   
   0.439
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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