STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_14690Dehydrogenase/ reductase 11; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (258 aa)    
Predicted Functional Partners:
C448_14208
NADH-ubiquinone oxidoreductase chain 49kDa; COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 
 0.855
C448_14378
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 
 0.855
C448_12786
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.712
C448_09099
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
  
 
0.557
C448_03486
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
  
 0.544
C448_14685
Hypothetical protein.
       0.540
C448_14368
COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I).
    
 0.474
C448_08299
Glycoside hydrolase family 2 sugar binding protein; COG3250 Beta-galactosidase/beta-glucuronidase.
   
 
 0.470
C448_12416
Metallophosphoesterase; COG0420 DNA repair exonuclease.
    
 
 0.465
C448_03361
COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
    
 
 0.442
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.