Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PDXKPyridoxal kinase. (312 aa)    
Predicted Functional Partners:
PNPO
Pyridoxamine 5'-phosphate oxidase.
    
 0.947
PDXP
Pyridoxal phosphatase.
    
 0.944
PGP
Phosphoglycolate phosphatase.
    
 0.921
ENSMEUP00000002953
annotation not available
 
    
 0.891
AOX1
Aldehyde oxidase 1.
     
 0.884
PLPBP
Pyridoxal phosphate binding protein.
  
  
 0.875
XDH
Xanthine dehydrogenase.
     
 0.863
ENSMEUP00000003057
annotation not available
     
 0.857
ENSMEUP00000014214
annotation not available
     
 0.857
ENSMEUP00000005629
annotation not available
     
  0.855
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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