SPRYD4 protein (Notamacropus eugenii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SPRYD4

SPRY domain containing 4. (178 aa)

Predicted Functional Partners:

ENSMEUP00000009428

0.709

GLS2

0.577

MIP

0.576

ENSMEUP00000002949

0.575

GTPBP8

0.534

ENSMEUP00000013878

0.527

ENSMEUP00000013395

0.464

TONSL

0.458

UBA52

0.433

ANKRD46

0.428

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKRD46	ENSMEUP00000013395	ENSMEUP00000005867	ENSMEUP00000013395	Ankyrin repeat domain 46.	annotation not available	0.517
ANKRD46	SPRYD4	ENSMEUP00000005867	ENSMEUP00000001100	Ankyrin repeat domain 46.	SPRY domain containing 4.	0.428
ANKRD46	UBA52	ENSMEUP00000005867	ENSMEUP00000012003	Ankyrin repeat domain 46.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.429
ENSMEUP00000002949	GLS2	ENSMEUP00000002949	ENSMEUP00000001130	annotation not available	Glutaminase 2.	0.575
ENSMEUP00000002949	MIP	ENSMEUP00000002949	ENSMEUP00000011464	annotation not available	Major intrinsic protein of lens fiber.	0.575
ENSMEUP00000002949	SPRYD4	ENSMEUP00000002949	ENSMEUP00000001100	annotation not available	SPRY domain containing 4.	0.575
ENSMEUP00000009428	ENSMEUP00000013395	ENSMEUP00000009428	ENSMEUP00000013395	annotation not available	annotation not available	0.511
ENSMEUP00000009428	SPRYD4	ENSMEUP00000009428	ENSMEUP00000001100	annotation not available	SPRY domain containing 4.	0.709
ENSMEUP00000009428	TONSL	ENSMEUP00000009428	ENSMEUP00000000969	annotation not available	Tonsoku like, DNA repair protein.	0.431
ENSMEUP00000009428	UBA52	ENSMEUP00000009428	ENSMEUP00000012003	annotation not available	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.453
ENSMEUP00000013395	ANKRD46	ENSMEUP00000013395	ENSMEUP00000005867	annotation not available	Ankyrin repeat domain 46.	0.517
ENSMEUP00000013395	ENSMEUP00000009428	ENSMEUP00000013395	ENSMEUP00000009428	annotation not available	annotation not available	0.511
ENSMEUP00000013395	ENSMEUP00000013878	ENSMEUP00000013395	ENSMEUP00000013878	annotation not available	annotation not available	0.860
ENSMEUP00000013395	SPRYD4	ENSMEUP00000013395	ENSMEUP00000001100	annotation not available	SPRY domain containing 4.	0.464
ENSMEUP00000013395	TONSL	ENSMEUP00000013395	ENSMEUP00000000969	annotation not available	Tonsoku like, DNA repair protein.	0.768
ENSMEUP00000013395	UBA52	ENSMEUP00000013395	ENSMEUP00000012003	annotation not available	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.999
ENSMEUP00000013878	ENSMEUP00000013395	ENSMEUP00000013878	ENSMEUP00000013395	annotation not available	annotation not available	0.860
ENSMEUP00000013878	SPRYD4	ENSMEUP00000013878	ENSMEUP00000001100	annotation not available	SPRY domain containing 4.	0.527
ENSMEUP00000013878	UBA52	ENSMEUP00000013878	ENSMEUP00000012003	annotation not available	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.865
GLS2	ENSMEUP00000002949	ENSMEUP00000001130	ENSMEUP00000002949	Glutaminase 2.	annotation not available	0.575