LIN54 protein (Notamacropus eugenii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LIN54

Lin-54 DREAM MuvB core complex component. (755 aa)

Predicted Functional Partners:

ENSMEUP00000012125

0.988

ENSMEUP00000007202

0.986

RBBP4

0.983

ENSMEUP00000007150

0.982

LIN37

0.978

FOXM1

0.935

ENSMEUP00000012435

0.917

RBL2

0.894

RBL1

0.881

MYBL1

0.878

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMEUP00000007150	ENSMEUP00000007202	ENSMEUP00000007150	ENSMEUP00000007202	annotation not available	annotation not available	0.996
ENSMEUP00000007150	ENSMEUP00000012125	ENSMEUP00000007150	ENSMEUP00000012125	annotation not available	annotation not available	0.997
ENSMEUP00000007150	ENSMEUP00000012435	ENSMEUP00000007150	ENSMEUP00000012435	annotation not available	annotation not available	0.849
ENSMEUP00000007150	FOXM1	ENSMEUP00000007150	ENSMEUP00000014615	annotation not available	Forkhead box M1.	0.873
ENSMEUP00000007150	LIN37	ENSMEUP00000007150	ENSMEUP00000008797	annotation not available	Lin-37 DREAM MuvB core complex component.	0.979
ENSMEUP00000007150	LIN54	ENSMEUP00000007150	ENSMEUP00000001107	annotation not available	Lin-54 DREAM MuvB core complex component.	0.982
ENSMEUP00000007150	RBBP4	ENSMEUP00000007150	ENSMEUP00000013123	annotation not available	RB binding protein 4, chromatin remodeling factor.	0.978
ENSMEUP00000007150	RBL1	ENSMEUP00000007150	ENSMEUP00000006887	annotation not available	RB transcriptional corepressor like 1.	0.698
ENSMEUP00000007150	RBL2	ENSMEUP00000007150	ENSMEUP00000006527	annotation not available	RB transcriptional corepressor like 2.	0.681
ENSMEUP00000007202	ENSMEUP00000007150	ENSMEUP00000007202	ENSMEUP00000007150	annotation not available	annotation not available	0.996
ENSMEUP00000007202	ENSMEUP00000012125	ENSMEUP00000007202	ENSMEUP00000012125	annotation not available	annotation not available	0.999
ENSMEUP00000007202	ENSMEUP00000012435	ENSMEUP00000007202	ENSMEUP00000012435	annotation not available	annotation not available	0.936
ENSMEUP00000007202	FOXM1	ENSMEUP00000007202	ENSMEUP00000014615	annotation not available	Forkhead box M1.	0.924
ENSMEUP00000007202	LIN37	ENSMEUP00000007202	ENSMEUP00000008797	annotation not available	Lin-37 DREAM MuvB core complex component.	0.992
ENSMEUP00000007202	LIN54	ENSMEUP00000007202	ENSMEUP00000001107	annotation not available	Lin-54 DREAM MuvB core complex component.	0.986
ENSMEUP00000007202	MYBL1	ENSMEUP00000007202	ENSMEUP00000009891	annotation not available	MYB proto-oncogene like 1.	0.935
ENSMEUP00000007202	RBBP4	ENSMEUP00000007202	ENSMEUP00000013123	annotation not available	RB binding protein 4, chromatin remodeling factor.	0.982
ENSMEUP00000007202	RBL1	ENSMEUP00000007202	ENSMEUP00000006887	annotation not available	RB transcriptional corepressor like 1.	0.964
ENSMEUP00000007202	RBL2	ENSMEUP00000007202	ENSMEUP00000006527	annotation not available	RB transcriptional corepressor like 2.	0.949
ENSMEUP00000012125	ENSMEUP00000007150	ENSMEUP00000012125	ENSMEUP00000007150	annotation not available	annotation not available	0.997