Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HMG20BHigh mobility group 20B. (251 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
    
 0.998
RCOR1
REST corepressor 1.
   
 0.998
PHF21A
PHD finger protein 21A.
    
 0.998
GSE1
Gse1 coiled-coil protein.
    
 0.978
ENSMEUP00000009812
annotation not available
    
 
 0.977
HMG20A
High mobility group 20A.
    
 
 0.975
ENSMEUP00000007659
annotation not available
   
 0.958
RCOR2
REST corepressor 2.
   
 0.958
SF3A2
Splicing factor 3a subunit 2.
    
   0.956
HDAC1
Histone deacetylase 1.
   
 0.937
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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