NTNG1 protein (Notamacropus eugenii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NTNG1

Netrin G1. (392 aa)

Predicted Functional Partners:

LRRC4C

0.979

LRRC4B

0.935

VASN

0.935

PIDD1

0.904

ENSMEUP00000002946

0.894

LRIT1

0.892

ENSMEUP00000007212

0.879

LRFN4

0.871

CHAD

0.869

LRRC24

0.861

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHAD	LRRC24	ENSMEUP00000005609	ENSMEUP00000001711	Chondroadherin.	Leucine rich repeat containing 24.	0.560
CHAD	NTNG1	ENSMEUP00000005609	ENSMEUP00000001208	Chondroadherin.	Netrin G1.	0.869
ENSMEUP00000002946	ENSMEUP00000007212	ENSMEUP00000002946	ENSMEUP00000007212	annotation not available	annotation not available	0.784
ENSMEUP00000002946	LRIT1	ENSMEUP00000002946	ENSMEUP00000007174	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 1.	0.744
ENSMEUP00000002946	NTNG1	ENSMEUP00000002946	ENSMEUP00000001208	annotation not available	Netrin G1.	0.894
ENSMEUP00000002946	PIDD1	ENSMEUP00000002946	ENSMEUP00000000786	annotation not available	P53-induced death domain protein 1.	0.785
ENSMEUP00000007212	ENSMEUP00000002946	ENSMEUP00000007212	ENSMEUP00000002946	annotation not available	annotation not available	0.784
ENSMEUP00000007212	LRIT1	ENSMEUP00000007212	ENSMEUP00000007174	annotation not available	Leucine rich repeat, Ig-like and transmembrane domains 1.	0.784
ENSMEUP00000007212	NTNG1	ENSMEUP00000007212	ENSMEUP00000001208	annotation not available	Netrin G1.	0.879
ENSMEUP00000007212	PIDD1	ENSMEUP00000007212	ENSMEUP00000000786	annotation not available	P53-induced death domain protein 1.	0.792
LRFN4	LRRC24	ENSMEUP00000007975	ENSMEUP00000001711	Leucine rich repeat and fibronectin type III domain containing 4.	Leucine rich repeat containing 24.	0.560
LRFN4	NTNG1	ENSMEUP00000007975	ENSMEUP00000001208	Leucine rich repeat and fibronectin type III domain containing 4.	Netrin G1.	0.871
LRIT1	ENSMEUP00000002946	ENSMEUP00000007174	ENSMEUP00000002946	Leucine rich repeat, Ig-like and transmembrane domains 1.	annotation not available	0.744
LRIT1	ENSMEUP00000007212	ENSMEUP00000007174	ENSMEUP00000007212	Leucine rich repeat, Ig-like and transmembrane domains 1.	annotation not available	0.784
LRIT1	NTNG1	ENSMEUP00000007174	ENSMEUP00000001208	Leucine rich repeat, Ig-like and transmembrane domains 1.	Netrin G1.	0.892
LRIT1	PIDD1	ENSMEUP00000007174	ENSMEUP00000000786	Leucine rich repeat, Ig-like and transmembrane domains 1.	P53-induced death domain protein 1.	0.781
LRRC24	CHAD	ENSMEUP00000001711	ENSMEUP00000005609	Leucine rich repeat containing 24.	Chondroadherin.	0.560
LRRC24	LRFN4	ENSMEUP00000001711	ENSMEUP00000007975	Leucine rich repeat containing 24.	Leucine rich repeat and fibronectin type III domain containing 4.	0.560
LRRC24	LRRC4B	ENSMEUP00000001711	ENSMEUP00000000309	Leucine rich repeat containing 24.	Leucine rich repeat containing 4B.	0.560
LRRC24	LRRC4C	ENSMEUP00000001711	ENSMEUP00000008331	Leucine rich repeat containing 24.	Leucine rich repeat containing 4C.	0.560