Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXD11Homeobox D11. (261 aa)    
Predicted Functional Partners:
SALL1
Spalt like transcription factor 1.
    
 
 0.677
HOXC4
Homeobox C4.
   
 
 0.571
GLI3
GLI family zinc finger 3.
    
 
 0.566
HOXB2
Homeobox B2.
    
 
 0.550
HOXD10
Homeobox D10.
   
  
 0.543
HOXB8
Homeobox B8.
   
 
 0.482
HAND2
Heart and neural crest derivatives expressed 2.
    
 
 0.462
MEIS1
Meis homeobox 1.
    
 
 0.429
MEIS2
Meis homeobox 2.
    
 
 0.429
ENSMEUP00000002710
annotation not available
    
 
 0.410
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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