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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDHALactate dehydrogenase A. (334 aa)    
Predicted Functional Partners:
PKM
Pyruvate kinase M1/2.
  
 0.944
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.926
ENSMEUP00000002737
annotation not available
   
 0.925
PC
Pyruvate carboxylase.
  
 0.922
ENSMEUP00000005170
annotation not available
  
 0.912
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.912
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
   
 0.909
LDHD
Lactate dehydrogenase D.
   
 
 0.901
ENSMEUP00000014162
annotation not available
  
 0.898
ENSMEUP00000011443
annotation not available
  
 0.896
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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