APLP1 protein (Notamacropus eugenii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

APLP1

Amyloid beta precursor like protein 1. (630 aa)

Predicted Functional Partners:

APBB1

0.906

SORL1

0.865

APBB2

0.848

NAE1

0.798

ENSMEUP00000004403

0.784

APBB3

0.784

CNTN5

0.765

NCSTN

0.748

APBA1

0.730

ENSMEUP00000011537

0.723

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APBA1	APLP1	ENSMEUP00000010964	ENSMEUP00000001394	Amyloid beta precursor protein binding family A member 1.	Amyloid beta precursor like protein 1.	0.730
APBB1	APBB2	ENSMEUP00000011776	ENSMEUP00000004352	Amyloid beta precursor protein binding family B member 1.	Amyloid beta precursor protein binding family B member 2.	0.692
APBB1	APLP1	ENSMEUP00000011776	ENSMEUP00000001394	Amyloid beta precursor protein binding family B member 1.	Amyloid beta precursor like protein 1.	0.906
APBB1	SORL1	ENSMEUP00000011776	ENSMEUP00000003797	Amyloid beta precursor protein binding family B member 1.	Sortilin related receptor 1.	0.463
APBB2	APBB1	ENSMEUP00000004352	ENSMEUP00000011776	Amyloid beta precursor protein binding family B member 2.	Amyloid beta precursor protein binding family B member 1.	0.692
APBB2	APLP1	ENSMEUP00000004352	ENSMEUP00000001394	Amyloid beta precursor protein binding family B member 2.	Amyloid beta precursor like protein 1.	0.848
APBB2	SORL1	ENSMEUP00000004352	ENSMEUP00000003797	Amyloid beta precursor protein binding family B member 2.	Sortilin related receptor 1.	0.438
APBB3	APLP1	ENSMEUP00000012453	ENSMEUP00000001394	Amyloid beta precursor protein binding family B member 3.	Amyloid beta precursor like protein 1.	0.784
APBB3	SORL1	ENSMEUP00000012453	ENSMEUP00000003797	Amyloid beta precursor protein binding family B member 3.	Sortilin related receptor 1.	0.497
APLP1	APBA1	ENSMEUP00000001394	ENSMEUP00000010964	Amyloid beta precursor like protein 1.	Amyloid beta precursor protein binding family A member 1.	0.730
APLP1	APBB1	ENSMEUP00000001394	ENSMEUP00000011776	Amyloid beta precursor like protein 1.	Amyloid beta precursor protein binding family B member 1.	0.906
APLP1	APBB2	ENSMEUP00000001394	ENSMEUP00000004352	Amyloid beta precursor like protein 1.	Amyloid beta precursor protein binding family B member 2.	0.848
APLP1	APBB3	ENSMEUP00000001394	ENSMEUP00000012453	Amyloid beta precursor like protein 1.	Amyloid beta precursor protein binding family B member 3.	0.784
APLP1	CNTN5	ENSMEUP00000001394	ENSMEUP00000007392	Amyloid beta precursor like protein 1.	Contactin 5.	0.765
APLP1	ENSMEUP00000004403	ENSMEUP00000001394	ENSMEUP00000004403	Amyloid beta precursor like protein 1.	annotation not available	0.784
APLP1	ENSMEUP00000011537	ENSMEUP00000001394	ENSMEUP00000011537	Amyloid beta precursor like protein 1.	annotation not available	0.723
APLP1	NAE1	ENSMEUP00000001394	ENSMEUP00000012569	Amyloid beta precursor like protein 1.	NEDD8 activating enzyme E1 subunit 1.	0.798
APLP1	NCSTN	ENSMEUP00000001394	ENSMEUP00000005358	Amyloid beta precursor like protein 1.	Nicastrin.	0.748
APLP1	SORL1	ENSMEUP00000001394	ENSMEUP00000003797	Amyloid beta precursor like protein 1.	Sortilin related receptor 1.	0.865
CNTN5	APLP1	ENSMEUP00000007392	ENSMEUP00000001394	Contactin 5.	Amyloid beta precursor like protein 1.	0.765