Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RDH5Retinol dehydrogenase 5. (318 aa)    
Predicted Functional Partners:
DHRS11
Dehydrogenase/reductase 11.
  
 
 0.890
CYP26A1
Cytochrome P450 family 26 subfamily A member 1.
    
 0.881
SRD5A2
Steroid 5 alpha-reductase 2.
   
 
 0.880
RDH10
Retinol dehydrogenase 10.
     
 0.873
HSD17B1
Hydroxysteroid 17-beta dehydrogenase 1.
  
 
 
0.871
RPE65
Retinoid isomerohydrolase RPE65.
     
 0.868
CYP19A1
Cytochrome P450 family 19 subfamily A member 1.
    
 0.868
RDH8
Retinol dehydrogenase 8.
  
 
 
0.867
ENSMEUP00000003036
annotation not available
    
 0.863
ALDH1A3
Aldehyde dehydrogenase 1 family member A3.
     
 0.859
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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