ENSMEUP00000001548 protein (Notamacropus eugenii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSMEUP00000001548

annotation not available (1724 aa)

Predicted Functional Partners:

ENSMEUP00000004844

0.876

ENSMEUP00000002920

0.823

PARD3

0.816

ENSMEUP00000005185

0.814

RAC3

0.814

RAC2

0.814

ENSMEUP00000006642

0.813

RRAS

0.785

ENSMEUP00000002811

0.783

ENSMEUP00000011749

0.742

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMEUP00000001548	ENSMEUP00000002811	ENSMEUP00000001548	ENSMEUP00000002811	annotation not available	annotation not available	0.783
ENSMEUP00000001548	ENSMEUP00000002920	ENSMEUP00000001548	ENSMEUP00000002920	annotation not available	annotation not available	0.823
ENSMEUP00000001548	ENSMEUP00000004844	ENSMEUP00000001548	ENSMEUP00000004844	annotation not available	annotation not available	0.876
ENSMEUP00000001548	ENSMEUP00000005185	ENSMEUP00000001548	ENSMEUP00000005185	annotation not available	annotation not available	0.814
ENSMEUP00000001548	ENSMEUP00000006642	ENSMEUP00000001548	ENSMEUP00000006642	annotation not available	annotation not available	0.813
ENSMEUP00000001548	ENSMEUP00000011749	ENSMEUP00000001548	ENSMEUP00000011749	annotation not available	annotation not available	0.742
ENSMEUP00000001548	PARD3	ENSMEUP00000001548	ENSMEUP00000002541	annotation not available	Par-3 family cell polarity regulator.	0.816
ENSMEUP00000001548	RAC2	ENSMEUP00000001548	ENSMEUP00000011206	annotation not available	Rac family small GTPase 2.	0.814
ENSMEUP00000001548	RAC3	ENSMEUP00000001548	ENSMEUP00000005656	annotation not available	Rac family small GTPase 3.	0.814
ENSMEUP00000001548	RRAS	ENSMEUP00000001548	ENSMEUP00000012218	annotation not available	RAS related.	0.785
ENSMEUP00000002811	ENSMEUP00000001548	ENSMEUP00000002811	ENSMEUP00000001548	annotation not available	annotation not available	0.783
ENSMEUP00000002811	ENSMEUP00000002920	ENSMEUP00000002811	ENSMEUP00000002920	annotation not available	annotation not available	0.579
ENSMEUP00000002811	ENSMEUP00000004844	ENSMEUP00000002811	ENSMEUP00000004844	annotation not available	annotation not available	0.472
ENSMEUP00000002811	ENSMEUP00000005185	ENSMEUP00000002811	ENSMEUP00000005185	annotation not available	annotation not available	0.456
ENSMEUP00000002811	RAC2	ENSMEUP00000002811	ENSMEUP00000011206	annotation not available	Rac family small GTPase 2.	0.492
ENSMEUP00000002811	RAC3	ENSMEUP00000002811	ENSMEUP00000005656	annotation not available	Rac family small GTPase 3.	0.492
ENSMEUP00000002811	RRAS	ENSMEUP00000002811	ENSMEUP00000012218	annotation not available	RAS related.	0.793
ENSMEUP00000002920	ENSMEUP00000001548	ENSMEUP00000002920	ENSMEUP00000001548	annotation not available	annotation not available	0.823
ENSMEUP00000002920	ENSMEUP00000002811	ENSMEUP00000002920	ENSMEUP00000002811	annotation not available	annotation not available	0.579
ENSMEUP00000002920	ENSMEUP00000004844	ENSMEUP00000002920	ENSMEUP00000004844	annotation not available	annotation not available	0.958