DEPTOR protein (Notamacropus eugenii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DEPTOR

DEP domain containing MTOR interacting protein. (401 aa)

Predicted Functional Partners:

MTOR

0.997

RPTOR

0.986

MLST8

0.984

ENSMEUP00000006058

0.933

AKT1S1

0.927

ATG13

0.927

RPS6KB2

0.922

ULK1

0.912

ENSMEUP00000004253

0.910

ENSMEUP00000010723

0.910

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKT1S1	ATG13	ENSMEUP00000005314	ENSMEUP00000011195	AKT1 substrate 1.	Autophagy related 13.	0.924
AKT1S1	DEPTOR	ENSMEUP00000005314	ENSMEUP00000001597	AKT1 substrate 1.	DEP domain containing MTOR interacting protein.	0.927
AKT1S1	ENSMEUP00000004253	ENSMEUP00000005314	ENSMEUP00000004253	AKT1 substrate 1.	annotation not available	0.980
AKT1S1	ENSMEUP00000006058	ENSMEUP00000005314	ENSMEUP00000006058	AKT1 substrate 1.	annotation not available	0.943
AKT1S1	ENSMEUP00000010723	ENSMEUP00000005314	ENSMEUP00000010723	AKT1 substrate 1.	annotation not available	0.908
AKT1S1	MLST8	ENSMEUP00000005314	ENSMEUP00000009298	AKT1 substrate 1.	MTOR associated protein, LST8 homolog.	0.992
AKT1S1	MTOR	ENSMEUP00000005314	ENSMEUP00000009462	AKT1 substrate 1.	Mechanistic target of rapamycin kinase.	0.997
AKT1S1	RPS6KB2	ENSMEUP00000005314	ENSMEUP00000000271	AKT1 substrate 1.	Ribosomal protein S6 kinase B2.	0.943
AKT1S1	RPTOR	ENSMEUP00000005314	ENSMEUP00000005504	AKT1 substrate 1.	Regulatory associated protein of MTOR complex 1.	0.999
AKT1S1	ULK1	ENSMEUP00000005314	ENSMEUP00000012548	AKT1 substrate 1.	Unc-51 like autophagy activating kinase 1.	0.900
ATG13	AKT1S1	ENSMEUP00000011195	ENSMEUP00000005314	Autophagy related 13.	AKT1 substrate 1.	0.924
ATG13	DEPTOR	ENSMEUP00000011195	ENSMEUP00000001597	Autophagy related 13.	DEP domain containing MTOR interacting protein.	0.927
ATG13	ENSMEUP00000004253	ENSMEUP00000011195	ENSMEUP00000004253	Autophagy related 13.	annotation not available	0.777
ATG13	ENSMEUP00000010723	ENSMEUP00000011195	ENSMEUP00000010723	Autophagy related 13.	annotation not available	0.678
ATG13	MLST8	ENSMEUP00000011195	ENSMEUP00000009298	Autophagy related 13.	MTOR associated protein, LST8 homolog.	0.930
ATG13	MTOR	ENSMEUP00000011195	ENSMEUP00000009462	Autophagy related 13.	Mechanistic target of rapamycin kinase.	0.944
ATG13	RPTOR	ENSMEUP00000011195	ENSMEUP00000005504	Autophagy related 13.	Regulatory associated protein of MTOR complex 1.	0.961
ATG13	ULK1	ENSMEUP00000011195	ENSMEUP00000012548	Autophagy related 13.	Unc-51 like autophagy activating kinase 1.	0.998
DEPTOR	AKT1S1	ENSMEUP00000001597	ENSMEUP00000005314	DEP domain containing MTOR interacting protein.	AKT1 substrate 1.	0.927
DEPTOR	ATG13	ENSMEUP00000001597	ENSMEUP00000011195	DEP domain containing MTOR interacting protein.	Autophagy related 13.	0.927