ENSMEUP00000001982 protein (Notamacropus eugenii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSMEUP00000001982

annotation not available (57 aa)

Predicted Functional Partners:

ENSMEUP00000006440

0.957

ENSMEUP00000010289

0.927

ENSMEUP00000013441

0.905

APOB

0.879

ENSMEUP00000006435

0.829

ENSMEUP00000002522

0.812

ENSMEUP00000006667

0.785

APOA5

0.734

ALDH8A1

0.676

ENSMEUP00000009139

0.618

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDH8A1	ENSMEUP00000001982	ENSMEUP00000015137	ENSMEUP00000001982	Aldehyde dehydrogenase 8 family member A1.	annotation not available	0.676
APOA5	APOB	ENSMEUP00000006421	ENSMEUP00000003817	Apolipoprotein A5.	Apolipoprotein B.	0.742
APOA5	ENSMEUP00000001982	ENSMEUP00000006421	ENSMEUP00000001982	Apolipoprotein A5.	annotation not available	0.734
APOA5	ENSMEUP00000002522	ENSMEUP00000006421	ENSMEUP00000002522	Apolipoprotein A5.	annotation not available	0.471
APOA5	ENSMEUP00000006435	ENSMEUP00000006421	ENSMEUP00000006435	Apolipoprotein A5.	annotation not available	0.408
APOA5	ENSMEUP00000006440	ENSMEUP00000006421	ENSMEUP00000006440	Apolipoprotein A5.	annotation not available	0.792
APOA5	ENSMEUP00000006667	ENSMEUP00000006421	ENSMEUP00000006667	Apolipoprotein A5.	annotation not available	0.614
APOA5	ENSMEUP00000010289	ENSMEUP00000006421	ENSMEUP00000010289	Apolipoprotein A5.	annotation not available	0.715
APOA5	ENSMEUP00000013441	ENSMEUP00000006421	ENSMEUP00000013441	Apolipoprotein A5.	annotation not available	0.602
APOB	APOA5	ENSMEUP00000003817	ENSMEUP00000006421	Apolipoprotein B.	Apolipoprotein A5.	0.742
APOB	ENSMEUP00000001982	ENSMEUP00000003817	ENSMEUP00000001982	Apolipoprotein B.	annotation not available	0.879
APOB	ENSMEUP00000002522	ENSMEUP00000003817	ENSMEUP00000002522	Apolipoprotein B.	annotation not available	0.426
APOB	ENSMEUP00000006435	ENSMEUP00000003817	ENSMEUP00000006435	Apolipoprotein B.	annotation not available	0.723
APOB	ENSMEUP00000006440	ENSMEUP00000003817	ENSMEUP00000006440	Apolipoprotein B.	annotation not available	0.951
APOB	ENSMEUP00000009139	ENSMEUP00000003817	ENSMEUP00000009139	Apolipoprotein B.	annotation not available	0.827
APOB	ENSMEUP00000010289	ENSMEUP00000003817	ENSMEUP00000010289	Apolipoprotein B.	annotation not available	0.948
APOB	ENSMEUP00000013441	ENSMEUP00000003817	ENSMEUP00000013441	Apolipoprotein B.	annotation not available	0.653
ENSMEUP00000001982	ALDH8A1	ENSMEUP00000001982	ENSMEUP00000015137	annotation not available	Aldehyde dehydrogenase 8 family member A1.	0.676
ENSMEUP00000001982	APOA5	ENSMEUP00000001982	ENSMEUP00000006421	annotation not available	Apolipoprotein A5.	0.734
ENSMEUP00000001982	APOB	ENSMEUP00000001982	ENSMEUP00000003817	annotation not available	Apolipoprotein B.	0.879