HDAC1 protein (Notamacropus eugenii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HDAC1

Histone deacetylase 1. (455 aa)

Predicted Functional Partners:

ARID4A

0.997

ENSMEUP00000010323

0.997

LEO1

0.974

RBBP4

0.956

RB1

0.952

ENSMEUP00000013484

0.941

ENSMEUP00000013963

0.937

KDM1A

0.935

RCOR1

0.931

SAP30

0.931

Your Current Organism:

Notamacropus eugenii

NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ENSMEUP00000010323	ENSMEUP00000003362	ENSMEUP00000010323	AT-rich interaction domain 4A.	annotation not available	0.721
ARID4A	ENSMEUP00000013484	ENSMEUP00000003362	ENSMEUP00000013484	AT-rich interaction domain 4A.	annotation not available	0.993
ARID4A	ENSMEUP00000013963	ENSMEUP00000003362	ENSMEUP00000013963	AT-rich interaction domain 4A.	annotation not available	0.822
ARID4A	HDAC1	ENSMEUP00000003362	ENSMEUP00000002192	AT-rich interaction domain 4A.	Histone deacetylase 1.	0.997
ARID4A	KDM1A	ENSMEUP00000003362	ENSMEUP00000005013	AT-rich interaction domain 4A.	Lysine demethylase 1A.	0.756
ARID4A	RB1	ENSMEUP00000003362	ENSMEUP00000000844	AT-rich interaction domain 4A.	RB transcriptional corepressor 1.	0.955
ARID4A	RBBP4	ENSMEUP00000003362	ENSMEUP00000013123	AT-rich interaction domain 4A.	RB binding protein 4, chromatin remodeling factor.	0.997
ARID4A	RCOR1	ENSMEUP00000003362	ENSMEUP00000005061	AT-rich interaction domain 4A.	REST corepressor 1.	0.972
ARID4A	SAP30	ENSMEUP00000003362	ENSMEUP00000008704	AT-rich interaction domain 4A.	Sin3A associated protein 30.	0.994
ENSMEUP00000010323	ARID4A	ENSMEUP00000010323	ENSMEUP00000003362	annotation not available	AT-rich interaction domain 4A.	0.721
ENSMEUP00000010323	ENSMEUP00000013484	ENSMEUP00000010323	ENSMEUP00000013484	annotation not available	annotation not available	0.993
ENSMEUP00000010323	ENSMEUP00000013963	ENSMEUP00000010323	ENSMEUP00000013963	annotation not available	annotation not available	0.822
ENSMEUP00000010323	HDAC1	ENSMEUP00000010323	ENSMEUP00000002192	annotation not available	Histone deacetylase 1.	0.997
ENSMEUP00000010323	KDM1A	ENSMEUP00000010323	ENSMEUP00000005013	annotation not available	Lysine demethylase 1A.	0.756
ENSMEUP00000010323	RB1	ENSMEUP00000010323	ENSMEUP00000000844	annotation not available	RB transcriptional corepressor 1.	0.955
ENSMEUP00000010323	RBBP4	ENSMEUP00000010323	ENSMEUP00000013123	annotation not available	RB binding protein 4, chromatin remodeling factor.	0.997
ENSMEUP00000010323	RCOR1	ENSMEUP00000010323	ENSMEUP00000005061	annotation not available	REST corepressor 1.	0.972
ENSMEUP00000010323	SAP30	ENSMEUP00000010323	ENSMEUP00000008704	annotation not available	Sin3A associated protein 30.	0.994
ENSMEUP00000013484	ARID4A	ENSMEUP00000013484	ENSMEUP00000003362	annotation not available	AT-rich interaction domain 4A.	0.993
ENSMEUP00000013484	ENSMEUP00000010323	ENSMEUP00000013484	ENSMEUP00000010323	annotation not available	annotation not available	0.993