Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARID3CAT-rich interaction domain 3C. (365 aa)    
Predicted Functional Partners:
ARID3A
AT-rich interaction domain 3A.
   
   0.928
ENSMEUP00000012060
annotation not available
    
   0.758
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.753
PBRM1
Polybromo 1.
   
 0.734
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.720
ARID3B
AT-rich interaction domain 3B.
    
   0.704
ARID4A
AT-rich interaction domain 4A.
   
 0.700
SIN3A
SIN3 transcription regulator family member A.
    
 0.657
SIN3B
SIN3 transcription regulator family member B.
    
 0.657
ACTL6A
Actin like 6A.
    
 0.641
Your Current Organism:
Notamacropus eugenii
NCBI taxonomy Id: 9315
Other names: Macropus eugenii, N. eugenii, tammar wallaby
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